浙江省湖州市50岁及以上新诊断HIV-1人群分子传播网络及耐药特征分析

Characterization of molecular transmission network and drug resistance in newly diagnosed HIV-1 population aged 50 years and above in Huzhou City, Zhejiang Province

  • 摘要:
    方法 收集2020年1月—2023年12月湖州市新报告且未治疗的≥50岁HIV感染者/AIDS患者(简称“HIV/AIDS”)病例样本332例,通过逆转录聚合酶链反应(RT⁃PCR)和巢式聚合酶链反应(nest⁃PCR)扩增pol基因,构建系统进化树分析亚型及构建阈值为1.0%的分子网络,通过美国斯坦福大学HIV⁃1耐药基因检测数据分析和检测系统分析耐药相关基因突变位点。
    结果 获得308例患者样本序列,发现9种基因亚型,其中CRF07_BC为172例(55.8%),CRF01_AE为61例(19.8%),CRF08_BC为43例(14.0%),CRF85_BC为9例(2.9%),CRF55_01B为8例(2.6%),B亚型为5例(1.6%),C亚型为4例(1.3%),CRF67_01B为3例(1.0%),以及独特重组型URF01_AE/07_BC为3例(1.0%)。在基因阈值1.0%时共形成28个分子簇,139例入网,入网率45.0%。最大传播簇C1包含44例CRF07_BC亚型感染者,均为异性性传播,以男性为主。共发现30例患者产生低度级以上耐药突变,治疗前耐药率为9.7%(30/308)。其中蛋白酶抑制剂(PI)相关耐药突变5例,占16.7%,非核苷类反转录酶抑制剂(NNRTI)相关耐药突变26例,占86.7%。
    结论 CRF07_BC亚型是湖州市≥50岁中老年HIV感染者成簇最多的型别,WX、NX及CX等3个区县均通过相关活动形成中老年传播簇。应加强湖州市≥50岁新报告病例的分子网络监测,及时发现疫情变化新特点,为调整老年人AIDS疫情防控措施提供科学依据。

     

    Abstract:
    Objective To analyze the characteristics of HIV-1 molecular network and pretreatment drug resistance genes in the middle-aged and elderly people aged ≥50 years in Huzhou City, Zhejiang Province, and to provide an evidence for the prevention and control of AIDS epidemic.
    Methods A total of 332 samples from the newly reported and untreated AIDS patients aged ≥50 years in Huzhou City from January 2020 to December 2023 were collected, pol genes were amplified by reverse transcription polymerase chain reaction (RT-PCR) and nested polymerase chain reaction (nest⁃PCR). Phylogenetic trees analyzing the subtypes were constructed, and a molecular network with a gene distance threshold of 1.0% were constructed at the same time. Mutation sites of drug resistance-related genes were identified through the Data Analysis and Detection System of HIV-1 Resistance Gene Detection of Stanford University, USA.
    Results Sequence samples of 308 patients were obtained, and 9 genotypes were identified, including CRF07_BCin 172 cases (55.8%), CRF01_AE in 61 cases (19.8%), CRF08_BC in 43 cases (14.0%), CRF85_BC in 9 cases (2.9%), and CRF55_01B in 8 cases (2.6%), subtypeB in 5 cases (1.6%), subtype C in 4 cases (1.3%), CRF67_01B in 3 cases (1.0%), and unique recombination URF01_AE/07_BC in 3 cases (1.0%). When the gene distance threshold was 1.0%, 28 molecular clusters were formed, and 139 cases were connected to the network, with an access rate of 45.0%. The largest transmission cluster C1 contained 44 cases infected with CRF07_BC subtype, all of whom were heterosexually transmitted, and predominantly by males. A total of 30 patients were found to have low-grade or higher drug resistance mutations, and the pretreatment drug resistance rate was 9.7% (30/308). Among them, there were 5 cases (16.7%) of protease inhibitor (PI) related drug resistance mutations, and 26 cases (86.7%) of non-nucleoside reverse transcriptase inhibitors (NNRTI) related drug resistance mutations.
    Conclusion CRF07_BC is the subtype with the most clusters among the middle-aged and elderly infected patients aged ≥50 years in Huzhou City. Middle-aged and elderly transmission clusters are formed within the three counties of WX, NX and CX through related activities. Molecular network monitoring on newly reported cases aged ≥50 years in Huzhou City should be strengthened so that the new characteristics of epidemic changes can be detected in time, providing a scientific basis for adjusting AIDS prevention and control measures for the elderly.

     

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